Category Archives: Darwin and Biology

Dem Bones

An article in today’s Times raises an interesting issue. The story concerns a Dr. Marcus Ross, who was recently awarded a Ph.D. in paleontology by the University of Rhode Island. His professors all seem to agree that he did good solid scientific work in the pursuit of his degree, but there is one curious wrinkle: the newly minted Dr. Ross is a young-earth creationist.

A Deep Misunderstanding

Readers will probably be familiar with one Deepak Chopra, who has made a handsome pile over the years by peddling pseudo-scientific New Age pablum to legions of credulous and uncritical admirers. Now, in an item at the Huffington Post, he swivels his intellectual popguns to bear upon Richard Dawkins’s book The God Delusion, and does about as little damage as you might expect. If you enjoy seeing intellectual justice in action, visit the website eclexys, where blogger “gordsellar” gives Chopra’s gormless review, which is a basinful of the purest hogwash, the fisking it deserves, in a post entitled Deepak Chopra: Who Is This Idiot?

Thank you Kevin Kim for linking to this post, which I might otherwise have missed.

Not To Worry

As I’ve mentioned recently, there is always something at Edge.org to engage the curious mind. One of the more interesting features of the website is the annual World Question project, which consists of asking a diverse collection of thinkers some simple but provocative question, and presenting their responses.

Dairy Selection

In yesterday’s post we noted the difficulty people naturally have in grasping the immensity of the timeframe at which evolution occurs. But despite the zoomed-in view our fleeting lifespans impose upon us, we can still detect the occasional tick of the evolutionary clock. Just such an observation has recently been made regarding the genetic trait known as lactose tolerance.

Time Trouble

I often wonder why some people are so resistant to Darwinism. The idea, once grasped, would seem to have everything going for it: it is elegant and simple, but despite its simplicity has amazing depth and explanatory power. It has been abundantly confirmed, by a diverse yet mutually supporting body of evidence, and provides a sturdy framework for our understanding of all life on Earth.

Nevertheless, the fact of Darwinian evolution is flatly rejected by a majority (!) of Americans. One obvious reason for this is the pernicious persistence of fundamentalist Biblical literalism in our country, with its irrational insistence upon the Old Testament creation myth. But the acceptance of such folklore as fact is abetted by another, quite natural difficulty: people have, generally, absolutely no concept of deep time.

It’s Not Rocket Science

I receive a number of daily newsletters. Among them is one from Physorg.com, a website that serves as a clearinghouse for news on various scientific fronts. The stories are generally brief, rarely very technical, and their purpose is simply to alert the reader to the fact that that some new development or other has occurred in the field at hand; the curious reader may then, having been given the scent, follow it to its source on his own initiative. The whole thing is usually very professionally done, and is an excellent way to keep abreast of current events in science and technology.

Imagine my disappointment, then, to observe that Darwin’s theory of evolution by natural selection, the utter incomprehension of which we may sadly take as a “given” among its many detractors in religious circles, is also a source of confusion, even at the broadest and most superficial level, to the editors of the Physorg newsletter. I refer to the following headline, found atop a story in yesterday’s issue:

Do galaxies follow Darwinian evolution?

What is it that bothers me so? Read on.

The Narrow Way

However you may feel about Richard Dawkins’ recent campaign against religion, he is indisputably among the greatest living scholars of natural history. One of the many fascinating ideas he discusses in his richly informative book The Ancestor’s Tale is the notion that “evolvability” itself may be amenable to natural selection. He suggests that certain watershed developments in life’s history greatly increased the facility of organisms to adapt, and that such developments would have themselves been adaptive. There is tricky footing here; it is important to keep in mind that natural selection never “looks ahead”. But, as Dawkins writes near the end of the book, “we might find with hindsight that the species that fill the world tend to be descended from ancestral species with a talent for evolution.” There are a number of developments that Dawkins cites as having improved life’s “evolvability”: among these are the birth of eukaryotic cells, multicellularism, segmentation, and sex. He also discusses another, less obvious milestone: bottlenecking.

Turn of the Tide

I’ve mentioned oysters before in these pages (I should probably give posts about them a separate category by now), but while scooping a few dozen of them out of Wellfleet Harbor this weekend, I noticed something about them that I hadn’t realized before, which is that they seem to exhibit a consistent chirality.

Great Minds Think Alike

Here’s an interesting bit of convergent evolution: I see from an item in today’s PhysOrg newsletter that tarantula venom targets the same pain-inducing capsaicin receptors that plants such as chili peppers have learned to activate to discourage predators. Learn more here.

Scientific Creativity, East and West

My friend Eugene Jen has sent me some links to a lively academic discussion. The topic is one that I am keenly interested in — evolutionary psychology — and the question at hand is what the future of the field might be, both here in the USA and in Asia.

Rings and Bridges

Yesterday’s post was about “ring species”, both as interesting natural phenomena in themselves, and as a reminder that the persistent human tendency to impose discrete categories on continuous phenomena can lead us, if not to outright error, at least to an inaccurate model of the world. Keeping in mind that we are all inclined toward this prejudice — Richard Dawkins calls it the “tyranny of the discontinuous mind” — can help us to avoid not only taxonomic pitfalls, but philosophical ones as well.

Circle of Life

One of the obstacles that some people face in understanding evolutionary theory is the natural tendency to think in discrete terms, parsing the continuity of the world into distinct categories. Richard Dawkins, in his book The Ancestor’s Tale, addresses this problem — which he calls “the tyranny of the discontinuous mind” — and offers some examples of how the categories we see in the natural world are not sharply bounded, but merge quite seamlessly into one another. I have promised to write about some of the fascinating ideas in this book, and this topic seems a good one to begin with.

Tree of Life: A Reader Comments

In a recent post, I recommended that readers with an interest in biology pay a visit to the Tree of Life Web Project, an interactive display of the taxonomic relationships linking all life on Earth. Upon seeing the post, one of our commenters, microbiologist Andrew Staroscik, mentioned that he had rather a low opinion of […]

That’s Life

As I mentioned a while back, one item getting frequent play in my rotating reading stack is the hefty volume The Ancestor’s Tale by Richard Dawkins, and as I expected, it is hugely engaging and informative. I’m about halfway done with it – the backwards pilgrimage is currently marching through the latter Carboniferous period, where we mammals have just been joined by the Sauropsids (including all reptiles and birds) . I’ve already learned a great many interesting things, and will be sprinkling some of them about these pages in days and weeks to come. For today, however, I’ll call the attention of any of you who have an interest in natural history to a marvelous website, the Tree of Life Web Project. Onto the sidebar it goes.

The Long March

There is more I’d like to say about Robert Wright’s Nonzero, and I’ll be getting to it tomorrow, most likely, but meanwhile I’ve just begun reading The Ancestor’s Tale, by Richard Dawkins.

Is Wright Wrong?

The multidimensional Kevin Kim, over at his one-of-a-kind weblog Big Hominid’s Hairy Chasms has posted a response to my mention of Robert Wright’s book Nonzero. In his post Kevin calls into question the idea of any directionality or purpose to biological evolution, making common cause in this regard with the late Stephen Jay Gould. Kevin writes:

[…I] wonder whether Wright isn’t making a mistake similar to that made by certain process theologians– people who (1) look at events happening in the “cream of the crop” of the evolutionary tumult and (2) mistakenly conclude that evolution at this top layer somehow represents a universal telos. I think human arrogance tends to suggest the “ladder” paradigm to us when we assess natural phenomena: we can’t help seeing ourselves as some sort of culmination of natural (or supernatural) processes. My own view is that life and mind are not representative of any telos at all: they are simply stochastic occurrences. Most of this cosmos, pretty though it be, is not alive.

Closed systems tend toward greater entropy over time. Within those closed systems, regions of anti-entropic activity may arise, but the overarching history of those systems is foreordained to follow the path of the “thermodynamic arrow,” as Stephen Hawking calls it. That is why, in a (theoretically) closed system like our universe, tiny pockets of life can form while most of the universe remains (as far as we know) abiotic. Billions or trillions of years hence, all that life will disintegrate as entropy settles more comfortably into its ancient throne. Those tiny pockets of life, then– those little bits of animated telos– are no evidence of a larger cosmic end or purpose. They– we– are a brief spark in the Nabokovian blackness: here and gone. The pessimist views this state of affairs with rue; the man of religion, by contrast, knows this means that each moment is absolutely precious. Life’s finitude and frailty are what give it its value.

Kevin, writing with customary eloquence, makes some very good points, and most of all I agree with his remarks about what gives life its value. But I think that he is missing the point made by Wright in his book, and is wrongly conflating the idea of telos with the possibility of there being a directionality, an “arrow”, to Darwinian evolution.

Big Game

I had put it aside for a while (I tend to have too many books going at once), but have just finished reading Nonzero – The Logic of Human Destiny, by Robert Wright. It is quite brilliant, and I highly recommend it.

“The Nobel laureate Steven Weinberg once ended a book on this note: ‘The more the universe seems comprehensible, the more it also seems pointless.’ Far be it from me to argue with a great physicist about how depressing physics is. For all I know, Weinberg’s realm of expertise, the realm of inanimate matter, really does offer no evidence of higher purpose. But when we move into the realm of animate matter — bacteria, cellular slime molds, and, most notably, human beings — the situation strikes me as different. The more closely we examine the drift of biological evolution and, especially, the drift of human history, the more there seems to be a point to it all. Because in neither case is ‘drift’ really the right word. Both of these processes have a direction, an arrow. At least, that is the thesis of this book.”

Designer Genes

The English clergyman and philosopher William Paley (1743-1805), who among his many other achievements was also the Christ’s College senior wrangler of 1763, is probably best known for his analogy of the “watchmaker”, which was an argument from nature for the existence of God.

Vita Brevis

My friend Eugene Jen has brought to my attention a sad item: Harriet, a Galápagos tortoise brought home on the Beagle by Charles Darwin himself, has died at the age of 176.

Harriet, we hardly knew ye.

The Simple Life

In considering the question of how “mere” matter can exhibit intentionality, I argued in a previous post that living things have their purposefulness and “aboutness” by virtue of their being designed, just as our artifacts have. The designer, however, in the case of living things, is not a purposeful Mind, but the blind processes of evolution and natural selection. If we are willing to acknowledge that our complex intentionality might, as we look backward through our ancestral history, take simpler and simpler forms, all the way back to the simplest early replicators, we might have in hand the “gradualist bridge” that many dualist philosophers insist cannot be built. We still have a major problem to solve, however, which is the origin of life itself. There have been many promising suggestions as to how life might have got started, but one stumbling block for many models has been a sort of Catch-22 problem in which the machinery for RNA replication needed to be in place in order for the ball to get rolling. NYU researcher Robert Shapiro, however, has a new and promising model that bypasses the need for preexisting RNA, and relies only on simpler organic reactions.

The paper is to be published in the June issue of the Quarterly Review of Biology, but you can read a bit more here (hat tip to Jon Mandell ).

Needless to say, a convincing demonstration of a mechanism whereby self-replicating organisms could have arisen in the early terrestrial environment would be an important result (to put it mildly), and would deal Intelligent Design proponents quite a blow.

There Goes the Neighborhood

It having been a long day – it’s eleven p.m., and I’ve just got back from the kung fu school – I’ll just leave you tonight with an interesting tidbit from today’s paper.

Apparently, recent study of the human genome has turned up an interesting kink in our lineage. It seems that the human-chimp divergence wasn’t quite as neat and tidy as was once believed; it now appears that after the human and chimp lines had parted ways, they rejoined, thereby producing chimp-human hybrids for a while (not sure what you’d call them, maybe “humps”). In other words, proto-humans, and then female hybrids, crossbred for a while with the proto-chimps.

This is bound to give some humans fits. I haven’t checked to see how the chimps feel about it. Read more here.

Intentional Grounding

One of the knottier topics in philosophy of mind is intentionality. The term refers to the way our thoughts are about their objects, and intentionality is often considered to be an exclusive hallmark of the mental. A thought can be “about” Paris, but a stone, or a lampshade, cannot be.

Sound Reasoning

For fans and foes of Daniel Dennett, here is a page that has links to several audio files of recent interviews with the feisty philosopher. They are big files, so they take a minute to download and get running.

Bright Idea

I’m sure we have all, at one time or another, had the experience of being dazzled by a bright light. The other day it happened to me, and I noticed something quite surprising about it.

Are We Not Men?

My friend Jess Kaplan, who often sends me interesting tidbits, has called my attention to a curious item from Turkey. It’s a story about a group of siblings who some are saying exhibit retrograde evolution.

The Bright Side

I’ve finally taken up Daniel Dennett’s latest effort, Breaking the Spell : Religion as a Natural Phenomenon. The book is an attempt to apply the methods of evolutionary psychology and sociobiology to a critical examination of the possible reasons for our fondness for religion. It has unsurprisingly ruffled a few feathers, something Dennett seems to relish.

Sea Monkeys

Quite a few years ago I ran across a book – I can’t recall where – called The Descent of Woman, by Elaine Morgan. It puts forward a most unusual idea about human evolution, and it’s worth a mention here. I’m curious to know if any of you are familiar with it.

Theological Semolina

It suddenly dawned on me this evening that I had not yet written a post formally introducing my readers to The Church of the Flying Spaghetti Monster. The world first learned of the Flying Spaghetti Monster’s role in the creation of all that is when one Bobby Henderson, a “concerned citizen”, wrote an open letter to the Kansas School Board in which he explained that humans received the spark of life from His Noodly Appendage, and described the teachings of Spaghetti Monsterism. Mr. Henderson quite reasonably requests that the Pastafarian account of the origin of life be taught along with Intelligent Design and Darwinism:

One third time for Intelligent Design, one third time for Flying Spaghetti Monsterism, and one third time for logical conjecture based on overwhelming observable evidence.

Pentimento

Educational and psychological theories of the mid-20th century saw the human brain as an infinitely flexible learning machine, with no “factory presets”. But the picture that is now emerging of our mental apparatus is of a suite of prewired cognitive modules, located in various areas of the brain, each of which has been shaped by natural selection for some useful task. These modules provide us with a common a priori framework for organizing our model of the world, and each module contributes an intuitive description of some aspect of our environment.

Logic and Faith III: Havlicek Steals the Ball

There are many in the scientific community – some of its most prominent spokespersons – who seem to have embraced a rather militant form of atheism. Richard Dawkins seems to be the most visible, but there are many others.

I used to be a strongly committed atheist myself, but my viewpoint has softened, and I would categorize myself now as a curious agnostic. One of the reasons that I abandoned the atheist position is the simple fact that reason itself is silent on the question of God’s existence. Efforts have been made to put faith in God onto a solid naturalist or philosophical foundation, but the fact remains that there is still no way to compel either belief in or denial of the existence of God.

Checking ID

The campaign by Biblical literalists to have their mythology masquerade as science in the public schools has been dealt another setback. In a welcome and much-needed decision, U.S. District Judge John E. Jones has struck down the Dover Township, PA school board’s attempt to smuggle “Intelligent Design” into the biology curriculum.

You can read the judge’s opinion here.

Selection Pressure

There is a heartening item in today’s New York Times: the creation myth known as Intelligent Design is having a tough time taking root. The ID movement’s complete and unsurprising lack of any scientific agenda is apparently beginning to catch up with it.

Amen, Brother.

Here’s Charles Krauthammer, in today’s Washington Post, getting off a shot at “Intelligent Design”:

“How ridiculous to make evolution the enemy of God. What could be more elegant, more simple, more brilliant, more economical, more creative, indeed more divine than a planet with millions of life forms, distinct and yet interactive, all ultimately derived from accumulated variations in a single double-stranded molecule, pliable and fecund enough to give us mollusks and mice, Newton and Einstein? Even if it did give us the Kansas State Board of Education, too.”

Read the full article here.

Vallicella, Dawkins, and Design

Yesterday I left a comment on a post by Bill Vallicella (who maintains one of the most interesting sites anywhere in the blogosphere) about Richard Dawkins’ antipathy toward the “theory” of Intelligent Design. Dr. Vallicella has responded here, and I’ll take this opportunity to respond to his response.

Intelligent Design

There has been quite a ruction lately about the Topeka, Kansas school board’s wish to accommodate literalist Christians by introducing new teaching standards for biology. The proposed guidelines would suggest to the impressionable student that the Darwinian idea, in which modern organisms (including humans) arose through a lengthy process of evolution by natural selection, is mere scientific dogma, and that an alternative account of the phenomena — “intelligent design” – should be given serious consideration.